JINLYUNG CHOI
Curriculum Vitae
December 2015
WORK
Iowa State University (1/2015-Present)
EDUCATION
University of Tennessee (8/2008-12/2014)
- Major: Ph.D. in Department of Chemical and Biomolecular Engineering
Inha University (3/2001-2/2008)
- Major: B.S. in Chemical Engineering and Biotechnology
- Interdisciplinary Major: Techno-Business
SKILLS
Meta-genome and transcriptome analysis
- Assembly, mapping, counting with statistical anlaysis
- C++, Java, python, shell
Sample preparation for RNA sequencing
- RNA extraction
- ANOVA data analysis
Cloning and Protein purification
- Expression, purification of enzyme
- HPLC for glycan related products
RESEARCH EXPERIENCE
LABORATORY: Molecular Biology Skills: DNA-Protein Interaction Assay: EMSA; Gene Manipulation: PCR, RT-PCR, Cloning, Transformation; Protein Assay: Protein purification, Nucleotide purification, HPLC, Fermenter, Anaerobic culture.
COMPUTATIONAL: Bioinformatics, Promoter prediction, Mathematical Modeling (JAVA, Matlab, C++)
TEACHING
Thermodynamics, Fall 2011
Transport phenomena, Fall 2013 and Spring 2014
RESEARCH INTEREST
1. Gene regulation and networking
2. DNA-Protein interaction assay
3. Metabolic Engineering
PUBLICATION
ORAL PRESENTATION
J. Choi, E. Cardenas, R. Williams, A. Howe. “RefSoil – Continuous progress in Soil Reference Database”, 7th Annual Argonne Soil Metagenomics Meeting, Chicago, Il. (2015)
J. Choi, L. Hauser, C. D. Cox. “Mechanism of GlyR3 regulation of manB in Clostridium thermocellum”, US-Korea Conference on Science, Technology and Entrepreneurship, Los Angeles, CA. (2012)
J. Choi, C. D. Cox. “Mathematical modeling of the CelC operon in Clostridium thermocellum“, Environmental Engineering Department Seminar, Knoxville, TN. (2010)
POSTER PRESENTATION
J. Choi, D. M. Klingeman, S. D. Brown, C. D. Cox. “The role of GlyR3 in regulating expression of cellulolytic activity in Clostridium thermocellum”, Society for Industrial Microbiology and Biotechnology, San Diego, CA. (2013)
J. Choi, Loren Hauser, C. D. Cox. “Mechanism of GlyR3 regulation of manB in Clostridium thermocellum”, BioEnergy Science Center Retreat, Chattanooga, TN. (2012)
J. Choi, C. D. Cox. “A calibrated, dynamic gene expression model of the celC operon in Clostridium thermocellum”, BioEnergy Science Center Retreat, Chattanooga, TN. (2011)
J. Choi, C. D. Cox. “Experimental and modeling investigation of the celC operon in Clostridium thermocellum “, BioEnergy Science Center Retreat, Asheville, NC. (2010)
J. Choi, C. D. Cox. “Auto regulation model of the celC operon of Clostridium thermocellum “,BioEnergy Science Center Retreat, Asheville, NC. (2009)
J. Linville, M. Linquist, J. Choi, C. D. Cox. “Promoter predictions using B. subtillis and TF Binding Factor Motifs”, BioEnergy Science Center Retreat, Asheville, NC. (2009)
J. Linville, J. Choi, M. Linquist, C. D. Cox. “Promoter prediction in Clostridium thermocellum”, BioEnergy Science Center Retreat, Chattanooga, TN. (2008)
J. Fleming, J. Choi, S. Ripp, A. Melechko, M. Doktycz, and G. Sayler. “Nanofabricated biosensors for microbial pathogen monitoring”, Oak Ridge National Laboratory Center for Nanophase Materials Sciences User’s Forum, Oak Ridge, TN. (2007)
Jin Choi 